pypdb

A Python API for the RCSB Protein Data Bank (PDB) (by williamgilpin)

Pypdb Alternatives

Similar projects and alternatives to pypdb based on common topics and language

  • deepblast

    Neural Networks for Protein Sequence Alignment

  • evodiff

    1 pypdb VS evodiff

    Generation of protein sequences and evolutionary alignments via discrete diffusion models

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

    InfluxDB logo
  • tape

    1 pypdb VS tape

    Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology. (by songlab-cal)

  • BioJava

    :book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.

  • EquiBind

    EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein

  • hPDB

    0 pypdb VS hPDB

    PDB parser in Haskell

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a better pypdb alternative or higher similarity.

pypdb reviews and mentions

Posts with mentions or reviews of pypdb. We have used some of these posts to build our list of alternatives and similar projects.

Stats

Basic pypdb repo stats
1
294
5.4
about 2 months ago

williamgilpin/pypdb is an open source project licensed under MIT License which is an OSI approved license.

The primary programming language of pypdb is Python.


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