deepvariant VS goatools

Compare deepvariant vs goatools and see what are their differences.

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. (by google)
Tensorflow deep-neural-network Genomics Science Dna sequencing Genome Bioinformatics Deep Learning ngs deepvariant Machine Learning
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goatools

Python library to handle Gene Ontology (GO) terms (by tanghaibao)
gene-ontology Genomics gene-set-enrichment fdr Bioinfomatics goslim-terms fisher-tests fdr-benjamini sidak holm-sidak
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deepvariant goatools
5 2
3,076 723
1.5% -
9.1 5.0
about 1 month ago 15 days ago
Python Python
BSD 3-clause "New" or "Revised" License BSD 2-clause "Simplified" License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

deepvariant

Posts with mentions or reviews of deepvariant. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-05-06.

goatools

Posts with mentions or reviews of goatools. We have used some of these posts to build our list of alternatives and similar projects.

What are some alternatives?

When comparing deepvariant and goatools you can also consider the following projects:

galaxy - Data intensive science for everyone.

masurca

FPL-Defence-Rotations - Best options to rotate defenders in Fantasy Premier League 2023-24

scanpy - Single-cell analysis in Python. Scales to >1M cells.

eggnog-mapper - Fast genome-wide functional annotation through orthology assignment

transformers - 🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

ncbi-genome-download - Scripts to download genomes from the NCBI FTP servers

Biopython - Official git repository for Biopython (originally converted from CVS)

gisaid-uploader - Simplified & efficient GISAID interactions.

af2complex - Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.

Hail - Cloud-native genomic dataframes and batch computing

deepvariant vs galaxy goatools vs galaxy deepvariant vs masurca goatools vs FPL-Defence-Rotations deepvariant vs scanpy goatools vs eggnog-mapper deepvariant vs transformers goatools vs ncbi-genome-download deepvariant vs Biopython goatools vs gisaid-uploader deepvariant vs af2complex goatools vs Hail