goatools
Python library to handle Gene Ontology (GO) terms (by tanghaibao)
galaxy
Data intensive science for everyone. (by galaxyproject)
| goatools | galaxy | |
|---|---|---|
| 2 | 4 | |
| 727 | 1,315 | |
| - | 1.4% | |
| 5.0 | 10.0 | |
| 27 days ago | 1 day ago | |
| Python | Python | |
| BSD 2-clause "Simplified" License | GNU General Public License v3.0 or later |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
goatools
Posts with mentions or reviews of goatools.
We have used some of these posts to build our list of alternatives
and similar projects.
-
Confused about gene name/id formats when doing enrichment with goatools
I'm trying to do enrichment analysis with goatools for the first time in my life, and I have no idea what I'm doing. (I'm a computer scientist with practically no bio background).
-
Cytoscape & GO
I eventually moved on to use this: https://github.com/tanghaibao/goatools
galaxy
Posts with mentions or reviews of galaxy.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-06-17.
-
Need for GUIs for bioinformatic tools?
Maybe it would help you to look at the galaxy project: GitHub main site
- BIOINFORMATICS PROJECT
- Any bioinfo open source projects looking for contributors?
- Developed a new kind of dual extruder system on fully custom built 3D printer
What are some alternatives?
When comparing goatools and galaxy you can also consider the following projects:
FPL-Defence-Rotations - Best options to rotate defenders in Fantasy Premier League 2023-24
nextflow - A DSL for data-driven computational pipelines