bioconvert
galaxy
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| bioconvert | galaxy | |
|---|---|---|
| 1 | 4 | |
| 351 | 1,313 | |
| 1.1% | 2.6% | |
| 6.1 | 10.0 | |
| 5 months ago | 5 days ago | |
| Python | Python | |
| GNU General Public License v3.0 only | GNU General Public License v3.0 or later |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
bioconvert
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found a script in a file i was sent and I'm wondering what exactly it does.
Hmm, so this sed construct seems to be used in a project called "bioconvert" for compressing fasta files.
galaxy
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Need for GUIs for bioinformatic tools?
Maybe it would help you to look at the galaxy project: GitHub main site
- BIOINFORMATICS PROJECT
- Any bioinfo open source projects looking for contributors?
- Developed a new kind of dual extruder system on fully custom built 3D printer
What are some alternatives?
malware-phylogeny - malware phylogeny for WSO web shell, Shellbot IRC bot and algorithm
nextflow - A DSL for data-driven computational pipelines
DNABERT - DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome
Biopython - Official git repository for Biopython (originally converted from CVS)
deepvariant - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
fastp - An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
sarek - Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
galaxy_ng - Ansible Galaxy Server - Issues on https://forum.ansible.com Docs on https://galaxy-ng.readthedocs.io/
ncbi-genome-download - Scripts to download genomes from the NCBI FTP servers
orfipy - Fast and flexible ORF finder
ansible-proxmox - Ansible for provisioning proxmox servers
goatools - Python library to handle Gene Ontology (GO) terms