RNA-seq-analysis
COVID-19-RNA-Seq-datasets
RNA-seq-analysis | COVID-19-RNA-Seq-datasets | |
---|---|---|
1 | 3 | |
840 | 75 | |
- | - | |
0.0 | 3.8 | |
over 2 years ago | about 2 years ago | |
Python | Python | |
MIT License | MIT License |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
RNA-seq-analysis
-
Looking for advice regarding R-programming and data analysis for immunology/biology projects
One github user crazyhottommy has repositories that cover multiple tools related to several sequencing experiments also including RNA-seq. Really good stuff https://github.com/crazyhottommy/RNA-seq-analysis
COVID-19-RNA-Seq-datasets
- What's so special about covid that it needs multiple vaccines and boosters and all these mandates and passports ?
-
Project ideas
Maybe you could present this with an explanation of each dataset? https://github.com/urmi-21/COVID-19-RNA-Seq-datasets
What are some alternatives?
pypsa-eur - PyPSA-Eur: A Sector-Coupled Open Optimisation Model of the European Energy System
TPMCalculator - TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files
zarp - The Zavolab Automated RNA-seq Pipeline
covid-19 - Novel Coronavirus 2019 time series data on cases
R-graph-gallery - A website that displays hundreds of R charts with their code
cellSNP - Pileup biallelic SNPs from single-cell and bulk RNA-seq data
rnaseq - RNA-seq analyses.
covid-19-data - Data on COVID-19 (coronavirus) cases, deaths, hospitalizations, tests • All countries • Updated daily by Our World in Data
GermlineMutationCalling - An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM files
scaredi-pi - Simple COVID-19 Ambient Reminder E-Ink Display for Pi