Python Coronavirus

Open-source Python projects categorized as Coronavirus

Top 17 Python Coronavirus Projects

  • covid-19-data

    Data on COVID-19 (coronavirus) cases, deaths, hospitalizations, tests • All countries • Updated daily by Our World in Data (by owid)

    Project mention: COVID no longer a global health emergency, World Health Organisation says | | 2023-05-05

    Finally! This is the right thing to do. COVID-19 now kills only 378 people each day globally (7-day rolling average, Source: This is extremely low compared to almost the entire pandemic.

  • coronavirus-tracker-api

    🦠 A simple and fast (< 200ms) API for tracking the global coronavirus (COVID-19, SARS-CoV-2) outbreak. It's written in python using the 🔥 FastAPI framework. Supports multiple sources!

  • Sonar

    Write Clean Python Code. Always.. Sonar helps you commit clean code every time. With over 225 unique rules to find Python bugs, code smells & vulnerabilities, Sonar finds the issues while you focus on the work.

  • covid-19

    Novel Coronavirus 2019 time series data on cases (by datasets)

  • seirsplus

    Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.

  • covasim

    COVID-19 Agent-based Simulator (Covasim): a model for exploring coronavirus dynamics and interventions

  • CoWin-Vaccine-Notifier

    Automated Python Script to retrieve vaccine slots availability and get notified when a slot is available.

  • covid19-sir

    CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.

    Project mention: Show HN: Deptry, a tool to check for dependency issues in a Python project | | 2022-09-14

    I have recently been working on a project called `deptry`, a command line tool to check for issues in the dependencies of Python projects. It can be used to find obsolete, missing, transitive and misplaced development dependencies. It supports the following types of projects:

    - Projects that use Poetry and a corresponding pyproject.toml file

    - Projects that use a requirements.txt file according to the pip standards


    * Documentation:

    * GitHub repository:


    I am quite happy with the project in its current form, but I also realise there is still a lot of room left for improvement. Therefore, I hope some people are willing to give it a try and provide me with feedback. So; if you have a project with a long list of dependencies and a little bit of spare time on your hands, please give it a try and let me know what you think!

    If you encounter any issues, find a bug, or have any other form of feedback, please don't hesitate to raise an issue in the GitHub repository, or leave a comment here.

    Kind regards,


    P.S. Many thanks to Hirokazu Takaya ( for incorporating it in the CI/CD pipeline of his project covid19-sir ( It provided me with very valuable early feedback.

  • InfluxDB

    Access the most powerful time series database as a service. Ingest, store, & analyze all types of time series data in a fully-managed, purpose-built database. Keep data forever with low-cost storage and superior data compression.

  • COVID-19-RNA-Seq-datasets

    A repository for sharing information on available COVID-19 RNA-Seq datasets

  • COVID19_AgentBasedSimulation

    COVID-ABS: An Agent-Based Model of COVID-19 Epidemic to Simulate Health and Economic Effects of Social Distancing Interventions

  • limnoria-plugins

    Limnoria plugins I wrote or forked.

  • covid-19-genomes

    Projects on COVID-19 topic of genomic sequencing - mostly DataViz

  • szabadfogasu-maszk

    A face mask detection system using Tensorflow/Keras and OpenCV, for the "<19 Szabadfogású Számítógép" competition in 2020.

  • epispot

    A tool for modeling infectious diseases.

  • corona-ml

    Machine learning to text-mine coronavirus research for

  • coronavirus-dashboard-pipeline-etl

    UK Coronavirus Dashboard ETL

  • Covid19Monitoring

    This is a small Python project for monitoring Covid19. I used Python with Flask and MySql.

  • covid_data_centroid_portfolio

    Python scripts for collecting and visualizing Covid-19 data day by day on a map.


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NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020). The latest post mention was on 2023-05-05.

Python Coronavirus related posts


What are some of the best open-source Coronavirus projects in Python? This list will help you:

Project Stars
1 covid-19-data 5,592
2 coronavirus-tracker-api 1,603
3 covid-19 1,154
4 seirsplus 635
5 covasim 221
6 CoWin-Vaccine-Notifier 102
7 covid19-sir 98
8 COVID-19-RNA-Seq-datasets 69
9 COVID19_AgentBasedSimulation 66
10 limnoria-plugins 36
11 covid-19-genomes 31
12 szabadfogasu-maszk 18
13 epispot 15
14 corona-ml 8
15 coronavirus-dashboard-pipeline-etl 5
16 Covid19Monitoring 4
17 covid_data_centroid_portfolio 0
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