COVID-19-RNA-Seq-datasets
RNA-seq-analysis
COVID-19-RNA-Seq-datasets | RNA-seq-analysis | |
---|---|---|
3 | 1 | |
75 | 809 | |
- | - | |
3.8 | 0.0 | |
about 2 years ago | over 2 years ago | |
Python | Python | |
MIT License | MIT License |
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COVID-19-RNA-Seq-datasets
- What's so special about covid that it needs multiple vaccines and boosters and all these mandates and passports ?
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Project ideas
Maybe you could present this with an explanation of each dataset? https://github.com/urmi-21/COVID-19-RNA-Seq-datasets
RNA-seq-analysis
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Looking for advice regarding R-programming and data analysis for immunology/biology projects
One github user crazyhottommy has repositories that cover multiple tools related to several sequencing experiments also including RNA-seq. Really good stuff https://github.com/crazyhottommy/RNA-seq-analysis
What are some alternatives?
TPMCalculator - TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files
pypsa-eur - PyPSA-Eur: A Sector-Coupled Open Optimisation Model of the European Energy System
covid-19 - Novel Coronavirus 2019 time series data on cases
zarp - The Zavolab Automated RNA-seq Pipeline
cellSNP - Pileup biallelic SNPs from single-cell and bulk RNA-seq data
R-graph-gallery - A website that displays hundreds of R charts with their code
covid-19-data - Data on COVID-19 (coronavirus) cases, deaths, hospitalizations, tests • All countries • Updated daily by Our World in Data
rnaseq - RNA-seq analyses.
scaredi-pi - Simple COVID-19 Ambient Reminder E-Ink Display for Pi
GermlineMutationCalling - An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM files