ngsLD Alternatives
Similar projects and alternatives to ngsLD based on common topics and language
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
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TPMCalculator
TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files
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fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better ngsLD alternative or higher similarity.
ngsLD reviews and mentions
Posts with mentions or reviews of ngsLD.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-09-19.
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angsd file conversion + subsetting help?
However, I realised I needed to go back and run NGSrelate on my samples (oops). This requires DoGlf 3, which according to the documentation, and this link, is a binary beagle file. I was in the process of rerunning angsd when my CPU hours ran out on the server, and it crashed (lets call this angsd run 2). It has however finished 4 days worth of analyses that I don't want to have to rerun.
Stats
Basic ngsLD repo stats
1
37
4.9
6 months ago
fgvieira/ngsLD is an open source project licensed under GNU General Public License v3.0 only which is an OSI approved license.
The primary programming language of ngsLD is C++.
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