TileDB-VCF Alternatives

Similar projects and alternatives to TileDB-VCF

• Hail

  5 934 9.8 Python TileDB-VCF VS Hail

  Cloud-native genomic dataframes and batch computing

  

• gwas2vcf

  1 39 0.0 Python TileDB-VCF VS gwas2vcf

  Convert GWAS summary statistics to VCF

  

• WorkOS

  workos.com sponsored

  The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.

  

• truvari

  1 285 9.2 Python TileDB-VCF VS truvari

  Structural variant toolkit for VCFs

  

• Vcflib

  0 595 2.6 C++ TileDB-VCF VS Vcflib

  C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings

  

• sgkit

  1 0 8.0 HTML TileDB-VCF VS sgkit

  We've moved to https://github.com/sgkit-dev/sgkit

  

• TileDB

  12 1,762 9.7 C++ TileDB-VCF VS TileDB

  The Universal Storage Engine

  

• gw

  2 123 9.6 C++ TileDB-VCF VS gw

  Genome browser and variant annotation

• InfluxDB

  www.influxdata.com sponsored

  Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

  

• octopus

  1 296 4.0 C++ TileDB-VCF VS octopus

  Bayesian haplotype-based mutation calling (by luntergroup)

  

• hap.py

  2 392 0.0 C++ TileDB-VCF VS hap.py

  Haplotype VCF comparison tools