Need guidance/plan/roadmap to transition from bioinformatics to systems biology and netwrok biology.

• metaGEM

  14 168 6.3 Python

  :gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data

At the risk of self promotion, I would invite you to check out the metaGEM 💎 GitHub repo/paper. This was originally my MS thesis which I published at the start of my PhD. It is a Snakemake workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from short read metagenomic data, i.e. bioinformatics + systems biology. If this is interesting, you may also want to check out my other pinned repos which include related tutorials and resources.

• InfluxDB

  www.influxdata.com featured

  Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

  

Suggest a related project