Top 13 Python medical-imaging Projects

UNetPlusPlus

2 2,170 3.1 Python

[IEEE TMI] Official Implementation for UNet++
medicaldetectiontoolkit

2 1,266 0.0 Python

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.
WorkOS

workos.com sponsored

The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.
dipy

3 669 9.9 Python

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
MONAILabel

1 541 7.8 Python

MONAI Label is an intelligent open source image labeling and learning tool.
visvis

1 226 0.0 Python

Visvis - the object oriented approach to visualization
rt-utils

2 175 3.1 Python

A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.
platipy

1 87 7.2 Python

Processing Library and Analysis Toolkit for Medical Imaging in Python
InfluxDB

www.influxdata.com sponsored

Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
FedCV

2 62 2.7 Python

FedCV: An Industrial-grade Federated Learning Framework for Diverse Computer Vision Tasks
mammography_metarepository

2 60 0.0 Python

Meta-repository of screening mammography classifiers
3d-multi-resolution-rcnn

1 25 0.0 Python

Official PyTorch implementaiton of the paper "3D Instance Segmentation Framework for Cerebral Microbleeds using 3D Multi-Resolution R-CNN."
Brain-Tumor-Segmentation-And-Classification

3 18 3.0 Python

Brain Tumor Segmentation And Classification using artificial intelligence
medicalAI

1 15 2.7 Python

Medical-AI is a AI framework specifically for Medical Applications https://aibharata.github.io/medicalAI/
Phantom

2 3 10.0 Python

Effective DICOM anonymization in Python (by cyrilzakka)

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).

Python medical-imaging related posts

Phantom Dicom Anonymization
1 project | /r/CKsTechNews | 20 Jan 2023
Brain Tumor Segmentation and Classification using ResUnet.
1 project | /r/learnmachinelearning | 24 Jan 2022
Github project showcase: Brain Tumor Segmentation and Classification using ResUnet.
1 project | /r/programming | 24 Jan 2022
3D rcnn
3 projects | /r/computervision | 7 Sep 2021
[R] Meta-repository of mammography classifiers
2 projects | /r/MachineLearning | 11 Aug 2021
Tf 2.0 data API help
1 project | /r/tensorflow | 20 Jan 2021
A note from our sponsor - InfluxDB
www.influxdata.com | 29 Apr 2024

Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality. Learn more →

Index

What are some of the best open-source medical-imaging projects in Python? This list will help you:

	Project	Stars
1	UNetPlusPlus	2,170
2	medicaldetectiontoolkit	1,266
3	dipy	669
4	MONAILabel	541
5	visvis	226
6	rt-utils	175
7	platipy	87
8	FedCV	62
9	mammography_metarepository	60
10	3d-multi-resolution-rcnn	25
11	Brain-Tumor-Segmentation-And-Classification	18
12	medicalAI	15
13	Phantom	3