vg VS Vcflib

Compare vg vs Vcflib and see what are their differences.

vg

tools for working with genome variation graphs (by vgteam)
variation-graph Graph genome-graph Genomics Dna
Source Code
biostars.org
Suggest alternative
Edit details

Vcflib

C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings (by vcflib)
Biology variant-calling Genomics vcf-manipulation Genotyping Haplotypecaller
Source Code
github.com
Suggest alternative
Edit details
InfluxDB
Our great sponsors
  • InfluxDB - Power Real-Time Data Analytics at Scale
  • WorkOS - The modern identity platform for B2B SaaS
  • SaaSHub - Software Alternatives and Reviews
Our great sponsors
vg Vcflib
2 -
1,060 595
1.7% 1.8%
9.4 2.6
2 days ago 4 days ago
C++ C++
GNU General Public License v3.0 or later MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

vg

Posts with mentions or reviews of vg. We have used some of these posts to build our list of alternatives and similar projects.
  • VG v1.36.0 just released!
    1 project | /r/UCSC | 11 Nov 2021
    Just released! VG v1.36.0, available at https://github.com/vgteam/vg/releases/tag/v1.36.0 offers improvements vg clip, including an option for clipping out big deletion edges while skipping multiple specified alleles.
  • VG v1.34.0 Release!
    1 project | /r/UCSC | 18 Aug 2021
    Just out! vg v1.34.0 code-named "Arguello" is available now: https://github.com/vgteam/vg/releases/tag/v1.34.0

Vcflib

Posts with mentions or reviews of Vcflib. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning Vcflib yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing vg and Vcflib you can also consider the following projects:

QuickQanava - :link: C++17 network / graph visualization library - Qt6 / QML node editor.

libsequence - libsequence: a C++ class library for evolutionary genetic analysis

euler - A distributed graph deep learning framework.

SeqAn - SeqAn's official repository.

bwa-mem2 - The next version of bwa-mem

Wham - Structural variant detection and association testing

seq - A high-performance, Pythonic language for bioinformatics

TileDB-VCF - Efficient variant-call data storage and retrieval library using the TileDB storage library.

bowtie2 - A fast and sensitive gapped read aligner

cellSNP - Pileup biallelic SNPs from single-cell and bulk RNA-seq data

hap.py - Haplotype VCF comparison tools

vg vs QuickQanava Vcflib vs libsequence vg vs euler Vcflib vs SeqAn vg vs bwa-mem2 Vcflib vs Wham vg vs seq Vcflib vs TileDB-VCF vg vs bowtie2 Vcflib vs cellSNP Vcflib vs hap.py