SeqAn VS Vcflib

Compare SeqAn vs Vcflib and see what are their differences.

SeqAn

SeqAn's official repository. (by seqan)
Biology Cpp14 Bioinfomatics High Performance Simd sequence-alignments Alignment Bwt Indexing Suffixarray Htslib sam-bam Fasta fastq-format Blast Seqan
Source Code
seqan.de
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Vcflib

C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings (by vcflib)
Biology variant-calling Genomics vcf-manipulation Genotyping Haplotypecaller
Source Code
github.com
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SeqAn Vcflib
- -
457 595
2.0% 1.8%
7.3 2.6
16 days ago 6 days ago
C++ C++
GNU General Public License v3.0 or later MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

SeqAn

Posts with mentions or reviews of SeqAn. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning SeqAn yet.
Tracking mentions began in Dec 2020.

Vcflib

Posts with mentions or reviews of Vcflib. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning Vcflib yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing SeqAn and Vcflib you can also consider the following projects:

libsequence - libsequence: a C++ class library for evolutionary genetic analysis

Wham - Structural variant detection and association testing

kanzi-cpp - Fast lossless data compression in C++

TileDB-VCF - Efficient variant-call data storage and retrieval library using the TileDB storage library.

sdsl-lite - Succinct Data Structure Library 3.0

cellSNP - Pileup biallelic SNPs from single-cell and bulk RNA-seq data

fstalign - An efficient OpenFST-based tool for calculating WER and aligning two transcript sequences.

hap.py - Haplotype VCF comparison tools

tabulate - Table Maker for Modern C++

seqan3 - The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

SeqAn vs libsequence Vcflib vs libsequence SeqAn vs Wham Vcflib vs Wham SeqAn vs kanzi-cpp Vcflib vs TileDB-VCF SeqAn vs sdsl-lite Vcflib vs cellSNP SeqAn vs fstalign Vcflib vs hap.py SeqAn vs tabulate SeqAn vs seqan3