maftools VS rhmmer

Compare maftools vs rhmmer and see what are their differences.

maftools

Summarize, Analyze and Visualize MAF files from TCGA or in-house studies. (by PoisonAlien)
maf-files cancer-genomics cancer-genome-atlas tcga Genomics Bioinformatics R
Source Code
bioconductor.org
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rhmmer

Simple R utilities for working with HMMER (by arendsee)
hmmer Bioinformatics
Source Code
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maftools rhmmer
3 1
417 14
- -
6.6 0.0
about 11 hours ago over 1 year ago
R R
MIT License MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

maftools

Posts with mentions or reviews of maftools. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2021-01-09.
  • MUtation data visulization in R
    1 project | /r/bioinformatics | 20 Jul 2021
    Have you tried to debug the error? The maftools repo on GitHub has an active issues section.
  • Function to change source code?
    2 projects | /r/Rlanguage | 9 Jan 2021
    Are you able to provide your R script with the data (or a small recreation) that you're using? That would be helpful in recreating what you're seeing and help determine if what's going on. You can always submit a (minimal, reproducible) example and explanation to the maintainers on the issues page -- which they may be able to help you diagnoses.

rhmmer

Posts with mentions or reviews of rhmmer. We have used some of these posts to build our list of alternatives and similar projects.

What are some alternatives?

When comparing maftools and rhmmer you can also consider the following projects:

TeamTeri - Bioinformatics on GCP, AWS or Azure

Baltica - Baltica: integrated differential junction usage

TCGAbiolinks - TCGAbiolinks

heatitup

go-feature-flag - GO Feature Flag is a simple, complete and lightweight self-hosted feature flag solution 100% Open Source. 🎛️

biomisc_R - command line bioinformatic scripts written in R

getting-started-with-genomics-tools-and-resources - Unix, R and python tools for genomics and data science

ermineR - R wrapper for ermineJ

drugfindR - Repository holding the code for the drugfindR R package

bio-sequence

rBLAST - Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package

maftools vs TeamTeri rhmmer vs Baltica maftools vs TCGAbiolinks rhmmer vs heatitup maftools vs go-feature-flag rhmmer vs biomisc_R maftools vs getting-started-with-genomics-tools-and-resources rhmmer vs ermineR maftools vs drugfindR rhmmer vs bio-sequence rhmmer vs rBLAST