rhmmer | heatitup | |
---|---|---|
1 | - | |
14 | - | |
- | - | |
0.0 | - | |
over 1 year ago | - | |
R | ||
MIT License | GNU General Public License v3.0 only |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
rhmmer
Posts with mentions or reviews of rhmmer.
We have used some of these posts to build our list of alternatives
and similar projects.
-
how to work with a hmmsearch table output?
I use this R package in Rstudio; https://github.com/arendsee/rhmmer
heatitup
Posts with mentions or reviews of heatitup.
We have used some of these posts to build our list of alternatives
and similar projects.
We haven't tracked posts mentioning heatitup yet.
Tracking mentions began in Dec 2020.
What are some alternatives?
When comparing rhmmer and heatitup you can also consider the following projects:
Baltica - Baltica: integrated differential junction usage
heatitup-complete - Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.