bambu VS cosmosR

Compare bambu vs cosmosR and see what are their differences.

bambu

Reference-guided transcript discovery and quantification for long read RNA-Seq data (by GoekeLab)
bambu transcript-reconstruction transcript-quantification long-reads nanopore-sequencing Transcriptomics rna-seq-analysis bioconductor R nanopore rna-seq
Source Code
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cosmosR

COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets. (by saezlab)
metabolomic-data proteomics phosphoproteomics data-integration Transcriptomics network-modelling
Source Code
saezlab.github.io
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bambu cosmosR
1 1
163 53
1.2% -
5.7 6.3
5 days ago 5 months ago
R R
GNU General Public License v3.0 only GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
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For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

bambu

Posts with mentions or reviews of bambu. We have used some of these posts to build our list of alternatives and similar projects.

cosmosR

Posts with mentions or reviews of cosmosR. We have used some of these posts to build our list of alternatives and similar projects.

What are some alternatives?

When comparing bambu and cosmosR you can also consider the following projects:

rna-seq-kallisto-sleuth - A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.

drugfindR - Repository holding the code for the drugfindR R package

TCGAbiolinks - TCGAbiolinks

rnaseq - RNA-seq analyses.

rBLAST - Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package

clustifyr - Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets

bambu vs rna-seq-kallisto-sleuth cosmosR vs drugfindR bambu vs drugfindR bambu vs TCGAbiolinks bambu vs rnaseq bambu vs rBLAST bambu vs clustifyr