UpSetR
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al.. (by hms-dbmi)
ggvenn
Venn Diagram by ggplot2, with really easy-to-use API. (by yanlinlin82)
| UpSetR | ggvenn | |
|---|---|---|
| 4 | 1 | |
| 732 | 154 | |
| 0.7% | - | |
| 0.0 | 3.4 | |
| 3 months ago | 6 days ago | |
| R | R | |
| GNU General Public License v3.0 or later | GNU General Public License v3.0 or later |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
UpSetR
Posts with mentions or reviews of UpSetR.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-06-05.
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Visually interesting pathway analysis?
Another package for Upset is UpSetR:: A shiny app is also available online. Complete info us available in their GitHub page.
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How does one create this kind of figure?
Those are good for up to 3 ~4 distinct groups but more than that you should take a peek at upset plots here
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Upset plots in Plotly/Dash?
Want this type of plot: https://github.com/hms-dbmi/UpSetR
- How might you display overlapping binary data other than a Venn diagram?
ggvenn
Posts with mentions or reviews of ggvenn.
We have used some of these posts to build our list of alternatives
and similar projects.
-
Venn diagram from binary variables?
Your data are not suitable for ggvenn? Looking at the example on this github page it seems that they are. If 0's and 1's don't work, then switch them to TRUEs and FALSEs using, e.g. dataframe$Heart <- dataframe$Heart==1
What are some alternatives?
When comparing UpSetR and ggvenn you can also consider the following projects:
complex-upset - A library for creating complex UpSet plots with ggplot2 geoms
gganimate - A Grammar of Animated Graphics
patchwork - The Composer of ggplots
esquisse - RStudio add-in to make plots interactively with ggplot2
ggsignif - Easily add significance brackets to your ggplots
circlize - Circular visualization in R
layer - Create stacked tilted maps
ganttrify - Create beautiful Gantt charts with ggplot2