TrackingR
Python code for "Tracking R of COVID-19 A New Real-Time Estimation Using the Kalman Filter". (by crondonm)
epispot
A tool for modeling infectious diseases. (by epispot)
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| TrackingR | epispot | |
|---|---|---|
| 2 | 4 | |
| 27 | 15 | |
| - | - | |
| 0.0 | 4.4 | |
| over 1 year ago | about 2 months ago | |
| Python | Python | |
| MIT License | GNU General Public License v3.0 only |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
TrackingR
Posts with mentions or reviews of TrackingR.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-06-01.
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Megathread Coronavirus * 12/07/21 - 18/07/21
Variable time span Jan 23, 2020 – Jul 14, 2021Data published by Arroyo-Marioli F, Bullano F, Kucinskas S, Rondón-Moreno C (2021) Tracking R of COVID-19: A new real-time estimation using the Kalman filter. PLoS ONE 16(1): e0244474. https://doi.org/10.1371/journal.pone.0244474Link https://github.com/crondonm/TrackingR/tree/main/Estimates-Database
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This is what a vaccine looks like. The case numbers might be remaining the same but the R number is plummeting atm
This is false. Data for that chart is pulled from this repo which uses source data from Johns Hopkins daily reports here which show Ireland as having zero cases for at least the past week.
epispot
Posts with mentions or reviews of epispot.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-04-12.
- Epispot: A Python Library for Modeling Infectious Diseases
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Contributing to epispot: made easy
$ git clone https://github.com/epispot/epispot $ cd epispot $ git checkout master $ git branch patch-1 $ git checkout patch-1
- The epispot Project Roadmap
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Upcoming epispot and epispot nightly features
Epispot Nightly is getting a brand new CLI! Infact, the code for a very very basic CLI already has a PR. What can it do? Just the command epispot about which outputs metadata about the package. However, this will be extended to other uses, such as what we described earlier for importing and exporting models. The PR can be viewed here.
What are some alternatives?
When comparing TrackingR and epispot you can also consider the following projects:
COVID-19 - Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE
seirsplus - Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.
epysurv - Epidemiological surveillance in Python
Coswara-Data - Data repository of Project Coswara