NanoSim VS OSGenome

Compare NanoSim vs OSGenome and see what are their differences.

NanoSim

Nanopore sequence read simulator (by bcgsc)
Genome transcriptome Simulator oxford-nanopore nanopore-sequencing
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OSGenome

An Open Source Web Application for Genetic Data (SNPs) using 23AndMe and Data Crawling Technologies (by mentatpsi)
23andme snps Genome data-crawling Python genetic-data Kendo Flask Genetics snpedia raw-data
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NanoSim OSGenome
1 2
213 107
3.3% -
5.6 3.2
about 2 months ago 2 months ago
Python Python
GNU General Public License v3.0 or later GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

NanoSim

Posts with mentions or reviews of NanoSim. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2021-06-26.
  • Raw nanowire sequencer data
    2 projects | /r/bioinformatics | 26 Jun 2021
    Alternatively, you can make your own data using NanoSim. I haven't used it myself yet but it generates signal level files with similar error profiles to the real thing. https://github.com/bcgsc/NanoSim

OSGenome

Posts with mentions or reviews of OSGenome. We have used some of these posts to build our list of alternatives and similar projects.

What are some alternatives?

When comparing NanoSim and OSGenome you can also consider the following projects:

bonito - A PyTorch Basecaller for Oxford Nanopore Reads

bioinformatics - Bioinformatic algorithms for the UCLA Bioinformatics Specialization

snappy - Helps you browse through and interpret your genotype data

Genetic-Trait-Detector - This python script detects known traits in raw human genetic data.

Structure_threader - A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".

flask - The Python micro framework for building web applications. [Moved to: https://github.com/pallets/flask]

Flask - The Python micro framework for building web applications.

BlackOps4Shop - Just a repo to store the elements in the store of the Call of Duty: Black Ops 4 black market

Hail - Cloud-native genomic dataframes and batch computing

NanoSim vs bonito OSGenome vs bioinformatics NanoSim vs bioinformatics OSGenome vs snappy OSGenome vs Genetic-Trait-Detector OSGenome vs Structure_threader OSGenome vs flask OSGenome vs Flask OSGenome vs BlackOps4Shop OSGenome vs Hail