Python Genetics

Open-source Python projects categorized as Genetics

Top 6 Python Genetic Projects

  • Hail

    Cloud-native genomic dataframes and batch computing

  • sgkit

    Scalable genetics toolkit

  • WorkOS

    The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.

  • OSGenome

    An Open Source Web Application for Genetic Data (SNPs) using 23AndMe and Data Crawling Technologies

    Project mention: How to get a DNA report using AncestryDNA/23andme raw data without uploading to another server? | /r/bioinformatics | 2023-04-28

    I think OSGenome by u/Sweet-Sir-10 would do the trick.

  • chatGPT-for-genetics

    Chat with Open Targets genetics database leveraging text-to-graphQL capabilities of OpenAI Codex.

  • Genetic-Trait-Detector

    This python script detects known traits in raw human genetic data.

    Project mention: Python script detects traits in raw human genetic data | news.ycombinator.com | 2023-09-18
  • Structure_threader

    A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020). The latest post mention was on 2023-09-18.

Python Genetics related posts

Index

What are some of the best open-source Genetic projects in Python? This list will help you:

Project Stars
1 Hail 929
2 sgkit 207
3 OSGenome 107
4 chatGPT-for-genetics 87
5 Genetic-Trait-Detector 30
6 Structure_threader 24
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