Refdb_generator Alternatives
Similar projects and alternatives to refdb_generator
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
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COG
Scripts and steps for making a consolidated COG database file for tools like DIAMOND. (by transcript)
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better refdb_generator alternative or higher similarity.
refdb_generator reviews and mentions
Posts with mentions or reviews of refdb_generator.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-10-20.
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Functional annotation of prokaryotic genomes
atm BIGG is not linked to any of the databases, but I do have another repo with BIGG genes (diamond DB) and BIGG reactions (HMMs). You could then just add these to the mantis config file (see here how) and use them alongside the other references.
Stats
Basic refdb_generator repo stats
1
4
0.0
about 2 years ago
PedroMTQ/refdb_generator is an open source project licensed under MIT License which is an OSI approved license.
The primary programming language of refdb_generator is Python.
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