Rnaseq Alternatives

Similar projects and alternatives to rnaseq

• salmon

  1 728 5.0 C++ rnaseq VS salmon

  🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment (by COMBINE-lab)

  

• PyDESeq2

  2 515 8.4 Python rnaseq VS PyDESeq2

  A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

  

• InfluxDB

  www.influxdata.com featured

  Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

  

• rnaseqc

  1 140 4.5 C++ rnaseq VS rnaseqc

  Fast, efficient RNA-Seq metrics for quality control and process optimization

  

• RNA-seq-analysis

  1 809 0.0 Python rnaseq VS RNA-seq-analysis

  RNAseq analysis notes from Ming Tang

• bambu

  1 163 5.7 R rnaseq VS bambu

  Reference-guided transcript discovery and quantification for long read RNA-Seq data

  

• mixcr

  1 310 9.7 Kotlin rnaseq VS mixcr

  MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

  

• rnaseq

  14 772 9.4 Nextflow rnaseq VS rnaseq

  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  

• SaaSHub

  www.saashub.com featured

  SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives

  

• TPMCalculator

  1 122 0.0 C++ rnaseq VS TPMCalculator

  TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files