Clustifyr Alternatives
Similar projects and alternatives to clustifyr based on common topics and language
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rna-seq-kallisto-sleuth
A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
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salmon
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment (by COMBINE-lab)
NOTE:
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clustifyr reviews and mentions
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Compare specific clusters across condition in scRNA-seq
You can use the package clustifyr in r with seurat and use a known data set that has already been identified. It will give you a correlation matrix to define how close your “unknown” cluster is to a already identified cluster. However this all depends on if you have a good reference data set clustifyr
Stats
Basic clustifyr repo stats
1
101
4.9
10 days ago
rnabioco/clustifyr is an open source project licensed under MIT License which is an OSI approved license.
The primary programming language of clustifyr is R.
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