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Biogo Alternatives
Similar projects and alternatives to biogo
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NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better biogo alternative or higher similarity.
biogo discussion
biogo reviews and mentions
Posts with mentions or reviews of biogo.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2024-02-11.
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A look at the Mojo language for bioinformatics
I've been thinking to learn Rust for these use cases, but always get frustrated with the complexity.
I find Go is a great middle-ground though! And now there starts to be a few more bio-related tools and toolkits out there, including:
- https://github.com/vertgenlab/gonomics
- https://github.com/biogo/biogo
- https://github.com/shenwei356/bio
... except from there being some really popular bio tools written in Go, like:
- https://github.com/shenwei356/seqkit
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How is GO used in bioinfo?
There is bíogo which is a general genomics library (dealing with file parsing, mostly) in the vein of Bioperl, BioPython and the other Bio* libraries. I've not really ever used it though - I almost used it the other day but the BAM parser was too bare bones for my purposes so I opted to do what I wanted in Python.
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So I evaluated Go for my next project and liked it, but ultimately didn't choose it
Btw, there is a bioinformatics scene in Go: https://github.com/biogo/biogo
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www.saashub.com | 27 Mar 2025
Stats
Basic biogo repo stats
3
392
2.5
12 months ago
biogo/biogo is an open source project licensed under BSD 3-clause "New" or "Revised" License which is an OSI approved license.
The primary programming language of biogo is Go.
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