Biogo Alternatives

Similar projects and alternatives to biogo

plotnine

36 3,828 9.6 Python biogo VS plotnine

A Grammar of Graphics for Python
poly

24 649 8.2 Go biogo VS poly

A Go package for engineering organisms.
InfluxDB

www.influxdata.com featured

Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
BlazeSeq

4 84 9.6 Mojo biogo VS BlazeSeq
seqkit

3 1,205 8.5 Go biogo VS seqkit

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
bio

1 88 6.5 Go biogo VS bio

A lightweight and high-performance bioinformatics package in Golang (by shenwei356)
gonomics

1 68 9.7 Go biogo VS gonomics

A collection of genomics software tools written in Go (golang).
mmtk-julia

1 11 7.2 Rust biogo VS mmtk-julia

Julia binding for MMTk
SaaSHub

www.saashub.com featured

SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a better biogo alternative or higher similarity.

Suggest an alternative to biogo

biogo reviews and mentions

Posts with mentions or reviews of biogo. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2024-02-11.

A look at the Mojo language for bioinformatics
9 projects | news.ycombinator.com | 11 Feb 2024

I've been thinking to learn Rust for these use cases, but always get frustrated with the complexity.
I find Go is a great middle-ground though! And now there starts to be a few more bio-related tools and toolkits out there, including:
- https://github.com/vertgenlab/gonomics
- https://github.com/biogo/biogo
- https://github.com/shenwei356/bio
... except from there being some really popular bio tools written in Go, like:
- https://github.com/shenwei356/seqkit
How is GO used in bioinfo?
2 projects | /r/bioinformatics | 27 Dec 2022

There is bíogo which is a general genomics library (dealing with file parsing, mostly) in the vein of Bioperl, BioPython and the other Bio* libraries. I've not really ever used it though - I almost used it the other day but the BAM parser was too bare bones for my purposes so I opted to do what I wanted in Python.
So I evaluated Go for my next project and liked it, but ultimately didn't choose it
1 project | /r/golang | 26 Sep 2021

Btw, there is a bioinformatics scene in Go: https://github.com/biogo/biogo
A note from our sponsor - SaaSHub
www.saashub.com | 2 May 2024

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