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RagTag Alternatives
Similar projects and alternatives to RagTag
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WorkOS
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DIF
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react-boilerplate
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InfluxDB
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RagTag reviews and mentions
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Bacterial reference-guided assembly vs. de-novo assembly unicycler?
Has anyone used ragtag to correct bacterial assemblies (https://github.com/malonge/RagTag/wiki/correct) ? Is it helpful?
- Question about genome assembly tools
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how to improve denovo genome assembly with additional sequencing data.
Use ragtag. https://github.com/malonge/RagTag
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Recommended tools for reference-guided genome assembly
RagTag. Not sure how well it works for small genomes.
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How to find sequence variations from contigs
My first idea was to assemble the contigs into scaffolds (e. g. using RagTag) and then look for a tool that can identify these mutations. However, I've also come across snippy, which is a tool that can identify mutations from reads. I don't know if I can just apply it to contigs though (probably not).
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A note from our sponsor - SaaSHub
www.saashub.com | 26 Apr 2024
Stats
malonge/RagTag is an open source project licensed under MIT License which is an OSI approved license.
The primary programming language of RagTag is Python.
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