Bwa-mem2 Alternatives
Similar projects and alternatives to bwa-mem2
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minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences (by 7PintsOfCherryGarcia)
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WorkOS
The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better bwa-mem2 alternative or higher similarity.
bwa-mem2 reviews and mentions
Posts with mentions or reviews of bwa-mem2.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-11-21.
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sqzlib - kseq compatible DNA fastA/Q encoding and compression library
Most importantly, sqzlib is fully compatible with klib/kseq.h one of the highest performance fastA/Q parsers. This means that any application that uses kseq.h for fastA/Q parsing, can be easily modified to use sqzlib instead. You can find patched versions of seqstats, minimap2, and bwa-mem2 in my github, or you can patch them yourself with the included patches.
Stats
Basic bwa-mem2 repo stats
1
0
3.2
over 2 years ago
7PintsOfCherryGarcia/bwa-mem2 is an open source project licensed under GNU General Public License v3.0 or later which is an OSI approved license.
The primary programming language of bwa-mem2 is C++.
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