Looking for a tool to convert a whole fasta file with CDS sequences to a fasta file with protein sequences.

• BioPython_Scripts

  1 1 0.0 Python

  BioPython scripts for conversion of GBK files or DNA-based FASTA files to protein FASTA files

  

• Biopython

  31 4,185 9.6 Python

  Official git repository for Biopython (originally converted from CVS)

  

Quickly looking over it, that's a bunch of different scripts/functions using https://biopython.org/ to parse FASTA files in different ways. Probably the answer you're looking for is in that txt, or have a look at the Biopython tutorial.

• InfluxDB

  www.influxdata.com featured

  Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

  

• orfipy

  2 46 1.8 Python

  Fast and flexible ORF finder

You can probably use or adapt https://github.com/urmi-21/orfipy. I've never used this but it looks fantastic.

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