Orfipy Alternatives
Similar projects and alternatives to orfipy based on common topics and language
-
Biopython
Official git repository for Biopython (originally converted from CVS)
-
-
InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
-
pyrodigal
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
-
BioPython_Scripts
BioPython scripts for conversion of GBK files or DNA-based FASTA files to protein FASTA files
-
reCOGnizer
A tool for domain based annotation with databases from the Conserved Domains Database
-
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better orfipy alternative or higher similarity.
orfipy reviews and mentions
Posts with mentions or reviews of orfipy.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-08-08.
-
Looking for a tool to convert a whole fasta file with CDS sequences to a fasta file with protein sequences.
You can probably use or adapt https://github.com/urmi-21/orfipy. I've never used this but it looks fantastic.
Stats
Basic orfipy repo stats
2
46
1.8
about 2 years ago
urmi-21/orfipy is an open source project licensed under MIT License which is an OSI approved license.
The primary programming language of orfipy is Python.
Popular Comparisons
SaaSHub - Software Alternatives and Reviews
SaaSHub helps you find the best software and product alternatives
www.saashub.com