how can I have R go through a fasta file opened with seqinr and run certain functions on each sequence?

This page summarizes the projects mentioned and recommended in the original post on /r/bioinformatics

InfluxDB - Power Real-Time Data Analytics at Scale
Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
www.influxdata.com
featured
SaaSHub - Software Alternatives and Reviews
SaaSHub helps you find the best software and product alternatives
www.saashub.com
featured
  • biomisc_R

    command line bioinformatic scripts written in R

  • https://github.com/olgatsiouri1996/biomisc_R/blob/main/sequence_statistics/calculate_biophysical_properties_multifasta.R this might help

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

    InfluxDB logo
NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a more popular project.

Suggest a related project

Related posts

  • Splitting multifast file into individual single fasta R

    1 project | /r/bioinformatics | 9 Aug 2021
  • biomisc_R: a repository of command line bioinformatic scripts written in R

    1 project | /r/bioinformatics | 7 Jun 2021
  • DESeq2 Normalization

    1 project | /r/bioinformatics | 9 Jun 2023
  • Help with understanding awk code

    2 projects | /r/bash | 19 May 2023
  • How to learn R programming?

    1 project | /r/RStudio | 11 May 2023