Help with Nanopore sequencing information and resources for gross chromosomal rearrangement analysis

This page summarizes the projects mentioned and recommended in the original post on /r/bioinformatics
nanopore structural-variation whole-genome-sequencing long-reads

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  • pipeline-structural-variation

    Discontinued Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data

    • Regarding analysis, I would suggest reading papers that use nanopore sequencing to identify structural variants and to read their method section. This can be on any species really, the approach is the same between them. A standard workflow can be found on ONT's github and on their EPI2ME labs platform (the github one is the most recent and up-to-date).

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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