typedb-bio
TypeDB Bio: Biomedical Knowledge Graph (by typedb-osi)
obsidian-garden
A knowledge management garden for https://obsidian.md, in which to grow your ideas (by tanepiper)
Our great sponsors
| typedb-bio | obsidian-garden | |
|---|---|---|
| 1 | 6 | |
| 73 | 192 | |
| - | - | |
| 4.6 | 0.0 | |
| 10 months ago | over 1 year ago | |
| Python | JavaScript | |
| - | Creative Commons Zero v1.0 Universal |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
typedb-bio
Posts with mentions or reviews of typedb-bio.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-06-10.
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How Roche Discovered Novel Potential Gene Targets with TypeDB
For this purpose, David built out a set of rules and schema in TypeQL. Below is just a very small excerpt of how such data can be modelled — taken from BioGrakn-Covid, a Vaticle community-led project by Konrad Mysliwiec (Data Science Software Engineer, Roche). Note that this is a selected schema; the full schema can be found within the BioGrakn-Covid schema file.
obsidian-garden
Posts with mentions or reviews of obsidian-garden.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-02-15.
- What are the best themes/templates for the purpose of academia?
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IMF and MOCs with folders
I borrow from the Obsidian Garden example for having an inbox for quick notes that I later go through to categorize as a different process.
- Staying organised during PhD
- I can barely remember anything from a paper
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Question for engineering student.
Check out https://obsidian.garden and https://publish.obsidian.md/hub/.
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Complete beginner here where to start?
Here's one sample vault named Obsidian Garden.
What are some alternatives?
When comparing typedb-bio and obsidian-garden you can also consider the following projects:
grakn - TypeDB: the polymorphic database powered by types
obsidian-publish-mkdocs - A Template to Publish Obsidian/Foam Notes on Github Pages (uses MkDocs)
topic-db - TopicDB is a topic maps-based semantic graph store (using SQLite for persistence)
TW5-TiddlyMap - Map drawing and topic visualization for your wiki
pygraft - Configurable Generation of Synthetic Schemas and Knowledge Graphs at Your Fingertips
life-disciplines-projects - Life-Disciplines-Projects (LDP) is a life-management framework built within Obsidian. Feel free to transform it for your own personal needs.