SeqAn
seqan3
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SeqAn | seqan3 | |
---|---|---|
- | 1 | |
457 | 388 | |
2.0% | 2.1% | |
7.3 | 8.9 | |
17 days ago | about 2 months ago | |
C++ | C++ | |
GNU General Public License v3.0 or later | GNU General Public License v3.0 or later |
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SeqAn
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Tracking mentions began in Dec 2020.
seqan3
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Hardcore metaprogramming in the wild
The SeqAn bioinformatics algorithms library includes quite advanced TMP. SeqAn basically provides an object oriented library of algorithms, but with compile-time (rather than runtime) dispatch. In other words, it implements compile-time OOP.
What are some alternatives?
Vcflib - C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings
vif - Easy, robust, and fast numerics in C++.
libsequence - libsequence: a C++ class library for evolutionary genetic analysis
json_struct - json_struct is a single header only C++ library for parsing JSON directly to C++ structs and vice versa
Wham - Structural variant detection and association testing
eventpp - Event Dispatcher and callback list for C++
kanzi-cpp - Fast lossless data compression in C++
cpp-sort - Sorting algorithms & related tools for C++14
sdsl-lite - Succinct Data Structure Library 3.0
tight_pair - A compressed pair for C++17
fstalign - An efficient OpenFST-based tool for calculating WER and aligning two transcript sequences.
diamond - Accelerated BLAST compatible local sequence aligner.