pydna
QUEEN
pydna | QUEEN | |
---|---|---|
1 | 5 | |
153 | 34 | |
- | - | |
9.4 | 5.6 | |
9 days ago | 9 days ago | |
Jupyter Notebook | Python | |
GNU General Public License v3.0 or later | MIT License |
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pydna
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Most optimal programming language for the field of genetics?
pydna: https://github.com/BjornFJohansson/pydna
QUEEN
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A simulator for restriction enzyme digestion and ligation-based cloning on Google colab
Theoretically yes. The GenBank output generated using QUEEN records the operational history of how the construct is generated. However, such visualization function you mentioned is still developing. The example plasmid map and simple flow map are the limits of the current visualization function.
- Show HN: A framework to describe and share DNA construction protocols
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A framework to efficiently describe and share reproducible DNA materials and construction protocols
GitHub: https://github.com/yachielab/QUEEN
- QUEEN: A domain-specific language to describe DNA construction processes.
What are some alternatives?
fastpages - An easy to use blogging platform, with enhanced support for Jupyter Notebooks.
bakta - Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
py - Repository to store sample python programs for python learning
jupyter-memgraph-tutorials - Learn to use Memgraph and GQLAlchemy quickly with the help of Jupyter Notebooks
full_spectrum_bioinformatics - An open-access bioinformatics text
transient_rotordynamic - transient dynamics of elastic rotors in journal bearings with Julia and Python
article_apply_test_in_jupyter_notebook - Article apply test in jupyter notebook
HyRiver-examples - Example Notebooks for HyRiver software stack
BioSequences.jl - Biological sequences for the julia language
bamboo - Cooling system modelling for liquid rocket engines.
julia-vim - Vim support for Julia.