ggpointdensity
:chart_with_upwards_trend: :bar_chart: Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot. (by LKremer)
ggtranscript
Visualizing transcript structure and annotation using ggplot2 (by dzhang32)
| ggpointdensity | ggtranscript | |
|---|---|---|
| 1 | 1 | |
| 396 | 118 | |
| - | - | |
| 0.0 | 10.0 | |
| 5 months ago | over 1 year ago | |
| R | R | |
| GNU General Public License v3.0 only | GNU General Public License v3.0 or later |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
ggpointdensity
Posts with mentions or reviews of ggpointdensity.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-11-11.
-
Titanic survival by gender and class. Learning R for the first time and the power of ggPlot
ggpointdensity for the ideal mix between a 2d_density plot and a standard scatter plot
ggtranscript
Posts with mentions or reviews of ggtranscript.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-03-03.
-
representing gene/transcript layout with variants, suitable approaches?
https://github.com/dzhang32/ggtranscript and https://github.com/kauralasoo/wiggleplotr look like good starting points, and since they output ggplot objects you can add some layers (like geom_segment or other geometries, and ggrepel for labels) to annotate them. Otherwise you can go the "from scratch" route using ggplot with some polygons and segments.
What are some alternatives?
When comparing ggpointdensity and ggtranscript you can also consider the following projects:
ggbernie - A ggplot2 geom for adding Bernie Sanders to ggplot2
seaborn - Statistical data visualization in Python
ggcats - The geom you always wished for adding cats to ggplot2
ggExtra - 📊 Add marginal histograms to ggplot2, and more ggplot2 enhancements
metR - Tools for Easier Analysis of Meteorological Fields