full_spectrum_bioinformatics
pydna
full_spectrum_bioinformatics | pydna | |
---|---|---|
1 | 1 | |
67 | 152 | |
- | - | |
6.2 | 9.4 | |
about 2 months ago | 6 days ago | |
Jupyter Notebook | Jupyter Notebook | |
- | GNU General Public License v3.0 or later |
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full_spectrum_bioinformatics
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Beginner's bioinformatics books for someone without any knowledge in biology?
A former advisor of mine wrote this up a bit ago and I felt it was solid (also a CS major but did some bio work and his text was written with that in mind). https://github.com/zaneveld/full_spectrum_bioinformatics
pydna
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Most optimal programming language for the field of genetics?
pydna: https://github.com/BjornFJohansson/pydna
What are some alternatives?
poly - A Go package for engineering organisms.
fastpages - An easy to use blogging platform, with enhanced support for Jupyter Notebooks.
ermineR - R wrapper for ermineJ
py - Repository to store sample python programs for python learning
amazon-genomics-cli-demos - Demos of what can be done with the Amazon Genomics CLI
jupyter-memgraph-tutorials - Learn to use Memgraph and GQLAlchemy quickly with the help of Jupyter Notebooks
virnet - VirNet: A deep attention model for viral reads identification
transient_rotordynamic - transient dynamics of elastic rotors in journal bearings with Julia and Python
Hail - Cloud-native genomic dataframes and batch computing
article_apply_test_in_jupyter_notebook - Article apply test in jupyter notebook
HyRiver-examples - Example Notebooks for HyRiver software stack
BioSequences.jl - Biological sequences for the julia language