drugfindR VS Baltica

Compare drugfindR vs Baltica and see what are their differences.

drugfindR

Repository holding the code for the drugfindR R package (by CogDisResLab)
R ilincs Transcriptomics Bioinformatics bioinformatics-pipeline
Source Code
Suggest alternative
Edit details

Baltica

Baltica: integrated differential junction usage (by dieterich-lab)
Bioinformatics bioinformatics-pipeline alternative-splicing Workflows data-integration
Source Code
dieterich-lab.github.io
Suggest alternative
Edit details
InfluxDB - Power Real-Time Data Analytics at Scale
Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
www.influxdata.com
featured
SaaSHub - Software Alternatives and Reviews
SaaSHub helps you find the best software and product alternatives
www.saashub.com
featured
drugfindR Baltica
1 1
7 7
- -
9.4 2.6
4 days ago about 1 year ago
R R
GNU General Public License v3.0 only MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

drugfindR

Posts with mentions or reviews of drugfindR. We have used some of these posts to build our list of alternatives and similar projects.

Baltica

Posts with mentions or reviews of Baltica. We have used some of these posts to build our list of alternatives and similar projects.
  • Novel Splice Variants in RNAseq Data
    1 project | /r/bioinformatics | 15 Sep 2021
    Also, we've been working on a framework with multiple workflows for differential splicing: Baltica: integrated differential junction usage (DJU) https://github.com/dieterich-lab/Baltica . Please have on mind that Baltica is work in progress, but the workflows are quite mature. Fell free to contact me if you have any questions!

What are some alternatives?

When comparing drugfindR and Baltica you can also consider the following projects:

bambu - Reference-guided transcript discovery and quantification for long read RNA-Seq data

awesome-single-cell - Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

cosmosR - COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.

rhmmer - Simple R utilities for working with HMMER

biomisc_R - command line bioinformatic scripts written in R

ermineR - R wrapper for ermineJ

maftools - Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

drugfindR vs bambu Baltica vs awesome-single-cell drugfindR vs cosmosR Baltica vs rhmmer drugfindR vs biomisc_R Baltica vs ermineR drugfindR vs maftools