dna_parser
spacepile
| dna_parser | spacepile | |
|---|---|---|
| 1 | 1 | |
| 1 | 13 | |
| - | - | |
| 7.1 | 4.9 | |
| 11 months ago | about 1 year ago | |
| Rust | Rust | |
| MIT License | MIT License |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
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For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
dna_parser
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dna_parser : A Python package written in Rust to encode DNA sequences for machine learning.
I started to work on a Python library written in Rust to encode DNA sequences (stored in the FASTA format) for machine learning applications. I recently released a first version even if the project is in a very early stage and things will be changed/upgraded/improved. dna_parser 0.1 can be easily installed with pip: pip install dna-parser
spacepile
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dna_parser : A Python package written in Rust to encode DNA sequences for machine learning.
I know very little about machine learning encoding but saw a somewhat similar project here https://github.com/brentp/spacepile
What are some alternatives?
tangram - Tangram is an all-in-one automated machine learning framework. [Moved to: https://github.com/tangramdotdev/tangram]
tch-rs - Rust bindings for the C++ api of PyTorch.
tangram - Tangram makes it easy for programmers to train, deploy, and monitor machine learning models.
krust - counts k-mers, written in rust
bytewax - Python Stream Processing
lance - Modern columnar data format for ML and LLMs implemented in Rust. Convert from parquet in 2 lines of code for 100x faster random access, vector index, and data versioning. Compatible with Pandas, DuckDB, Polars, Pyarrow, with more integrations coming..
Nuclia DB - NucliaDB, The AI Search database for RAG
burn - Burn is a new comprehensive dynamic Deep Learning Framework built using Rust with extreme flexibility, compute efficiency and portability as its primary goals. [Moved to: https://github.com/Tracel-AI/burn]
base2048 - Binary encoding with base-2048 in Python with Rust