dna_parser : A Python package written in Rust to encode DNA sequences for machine learning.

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  • dna_parser

    A Python module written in rust to encode DNA sequences for machine learning

  • I started to work on a Python library written in Rust to encode DNA sequences (stored in the FASTA format) for machine learning applications. I recently released a first version even if the project is in a very early stage and things will be changed/upgraded/improved. dna_parser 0.1 can be easily installed with pip: pip install dna-parser

  • spacepile

    convert reads from repeated measures of same piece of DNA into spaced matricies for deep learners.

  • I know very little about machine learning encoding but saw a somewhat similar project here https://github.com/brentp/spacepile

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