bracken_plot
timevis
| bracken_plot | timevis | |
|---|---|---|
| 2 | 2 | |
| 5 | 643 | |
| - | - | |
| 5.9 | 5.0 | |
| about 2 months ago | 9 months ago | |
| R | R | |
| MIT License | GNU General Public License v3.0 or later |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
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For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
bracken_plot
- analysis of kraken2 reports
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Looking for some resources on creating a graph like this. Or the name of a graph like this so I can look up specific resources for R. :)
These are commonly called stacked bar plots or taxa relative abundance plots. You frequently see these plots in microbiome research papers where the authors performed either 16S or metagenomic sequencing. Given the type of data you have, you can use tools that are already available. Take a look at the R source code for this tool, which includes features like color palette recycling and grouping of taxa below a minimum abundance threshold into an “other” category.
timevis
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R Shiny Help
best way for any of this, is figure out smaller parts and combining them. https://shiny.rstudio.com/reference/shiny/0.14/fileInput.html - for the fileinput https://daattali.com/shiny/timevis-demo/ - for timevis.
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Examples of R packages which include a Shiny app?
timevis
What are some alternatives?
electricShine - Create Standalone Installable Shiny Apps
covid19-event-risk-planner - COVID19 risk planner R-Shiny application
regexplain - 🔍 An RStudio addin slash regex utility belt
easystats - :milky_way: The R easystats-project
shinyalert - 🗯️ Easily create pretty popup messages (modals) in Shiny
targets-tutorial - Short course on the targets R package
esquisse - RStudio add-in to make plots interactively with ggplot2
shinyscreenshot - 📷 Capture screenshots of entire pages or parts of pages in Shiny apps
snapper - snap images of html objects using only JavaScript in shiny apps
feltr - A R package to read Felt maps to simple feature data 🗺️
tidymodules - An Object-Oriented approach to Shiny modules
shinyFeedback - display user feedback next to Shiny inputs