bonito VS Mattermost

Compare bonito vs Mattermost and see what are their differences.

bonito

A PyTorch Basecaller for Oxford Nanopore Reads (by nanoporetech)

Mattermost

Mattermost is an open source platform for secure collaboration across the entire software development lifecycle.. (by mattermost)
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bonito Mattermost
8 142
372 28,080
0.0% 0.8%
7.3 9.9
5 months ago 3 days ago
Python TypeScript
GNU General Public License v3.0 or later GNU General Public License v3.0 or later
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

bonito

Posts with mentions or reviews of bonito. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-05-02.
  • miRNA Detection
    1 project | /r/biotechnology | 13 Nov 2022
    There is a technology called Nanopore. I’ve never used it myself but the concept was to be able to sequence samples of nucleic acid out in the field. A quick pubmed search indicated that it can detect miRNA, but maybe with some modifications. https://nanoporetech.com Best of luck with it!
  • Oxford University Press’s new logo is unfathomably bad
    1 project | news.ycombinator.com | 10 Nov 2022
    > An unpopular opinion: there are too many other logos that look like the original logo

    There are also too many logos that look like the new logo. The first blue circle logos that spring to mind are Blue Circle Cement/Tarmac/Lafarge [1] and Oxford Nanopore [2].

    [1]: https://en.wikipedia.org/wiki/Tarmac_(company)

    [2]: https://nanoporetech.com/

  • PORTABLE DNA SEQUENCER!!!!
    1 project | /r/genetics | 10 Aug 2022
  • Ask HN: Who is hiring? (May 2022)
    23 projects | news.ycombinator.com | 2 May 2022
    Oxford Nanopore Technologies (https://nanoporetech.com/) | Front end developer | Full-time | Oxford | Remote (UK)

    Oxford Nanopore Technologies is headquartered at the Oxford Science Park outside Oxford, UK, with satellite offices and commercial presence in many global locations across the US, APAC and Europe. Our DNA/RNA sequencing platform is the only technology that offers real-time analysis (for rapid insights), in fully scalable formats from pocket to population scale. Our goal is to enable the analysis of any living thing, by anyone, anywhere.

    Tech stack: Electron, Stencil, React, Typescript, RxJS, GRPC

    For more details, please email: [email protected]

  • El primer genoma completo de un ser humano abre una nueva era en la ciencia
    1 project | /r/brasilnoticias | 31 Mar 2022
  • Buying artificial membranes
    1 project | /r/SyntheticBiology | 12 Jan 2022
    Ok this isn't really my area but I know that there are labs/companies performing these types of electrical current disturbance measurements of membrane-type proteins for both DNA sequencing (https://nanoporetech.com/) and protein sequencing (https://www.nature.com/articles/s41587-019-0401-y).
  • ELI5: Why home blood tests do not exist, while we can measure our sugar levels with personal devices at home?
    1 project | /r/explainlikeimfive | 7 Jan 2022
    Now nanopore sequencing is solid state and gets much longer reads. https://nanoporetech.com/ and https://en.wikipedia.org/wiki/Nanopore_sequencing
  • Raw nanowire sequencer data
    2 projects | /r/bioinformatics | 26 Jun 2021
    Also best of luck with the basecaller, I will say that the latest guppy versions are very good, both in terms of accuracy and speed, as they are GPU accelerated and the best I've seen in accuracy. You may also be interested in Bonito, a tool to generate your own GPU basecalling model or tweak existing models to your data. https://github.com/nanoporetech/bonito.

Mattermost

Posts with mentions or reviews of Mattermost. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2024-04-01.
  • Discord to Start Showing Ads for Gamers to Boost Revenue
    3 projects | news.ycombinator.com | 1 Apr 2024
    > Tell me another platform that is free, has realtime chat, voice and video, has stable service, allows sharing images and other media, with good ownership management... and is open source.

    Mattermost: https://mattermost.com/

    Rocket.Chat: https://www.rocket.chat/

    Nextcloud Talk: https://nextcloud.com/talk/

    Self hosting and some assembly required. I've run all of them on cheap VPSes to explore a Slack/Discord replacement, neither was mindblowing but all of them seemed okay (Nextcloud's offering was rather barebones, though).

    Audio and video support varies because getting those right is challenging, at best you'd just integrate with something like Jitsi, that one's actually pretty good for meetings and such: https://jitsi.org/ and has a cloud version too: https://meet.jit.si/ (yet people still go for Zoom and it's odd UI/UX choices)

    I actually rather liked forums back in the day, but I guess nobody will be setting up that many phpBB instances in the current year, though projects like Discourse also seem promising: https://www.discourse.org/

    I don't think many people at all will be leaving Discord, due to how entrenched the platform is (network effect): if you want people to help you with what you're working on, you go where they are, not vice versa.

  • Ask HN: Who is hiring? (March 2024)
    12 projects | news.ycombinator.com | 1 Mar 2024
    Mattermost, Inc. | Senior React Native Engineer | REMOTE (US Only) | Full-Time

    At Mattermost we build an open core, chat and collaboration platform focused on making users with mission critical work more productive while also allowing our customers to self-deploy and have full control over their own data.

    We’re looking for a Senior React Native Engineer who has the depth to significantly move the performance needle of our app while also having the breadth to contribute across our stack.

    Check out our open source mobile codebase: https://github.com/mattermost/mattermost-mobile. Meta uses the Mattermost RN app as the benchmark for performance testing of their Hermes JS engine: https://mattermost.com/blog/hermes-mattermost/. Want to set the bar for what a complex, high performing React Native app can do? Want to do it open source? Join our team!

    Apply here: https://jobs.lever.co/mattermost/a38ea8f0-6c27-4178-a988-801...

  • List of your reverse proxied services
    29 projects | /r/selfhosted | 5 Dec 2023
    Mattermost for Chat, and also for Notifications sent by Uptime-Kuma
  • IT Pro Tuesday #259 - Collaboration Platform, Cisco Training, SyncML Tracing & More
    2 projects | /r/ITProTuesday | 11 Jul 2023
    Mattermost offers a secure, open-source solution for seamless collaboration throughout the software development lifecycle. Tailored to cater to technical and operational needs, it easily integrates with a wide range of third-party developer tools—to streamline development and engineering workflows. With self-hosted and private cloud deployment options, coupled with access to the source code, you have complete control over the data via a shared, adaptable, and extensible platform designed specifically for your team. Kindly suggested by Molasses_Major.
  • A Slack clone in 5 lines of bash
    5 projects | news.ycombinator.com | 4 Jul 2023
    FWIW, most of the TypeScript lines of code are in the E2E tests[0] and the webapp dir [1], which, as the name suggests, contains "the client code for the Mattermost web app". So we should really only be counting lines of Go code.

    [0] https://github.com/mattermost/mattermost/tree/master/e2e-tes...

    [1] https://github.com/mattermost/mattermost/tree/master/webapp

  • Alternatives List
    3 projects | /r/freespeechdiscord | 2 Jul 2023
    Mattermost is an good alternative to companies, workers and teams.
  • Discord alternative?
    1 project | /r/de_EDV | 20 Jun 2023
    oder auch Mattermost
  • A few discord alternatives for you to look at
    7 projects | /r/discordapp | 7 Jun 2023
    Revolt, Guilded, Element (Matrix Client), Matrix, Cinny (Matrix Client), Spacebar, Rocket Chat, Mikoto, Mattermost, Teamspeak and Nertivia
  • Trello Alternative
    10 projects | /r/selfhosted | 6 Jun 2023
    might be overkill but https://mattermost.com/
  • Any alternatives to OpenProject and Mattermost that supports ARM?
    2 projects | /r/selfhosted | 31 May 2023
    But it seems that you're right for Mattermost.

What are some alternatives?

When comparing bonito and Mattermost you can also consider the following projects:

pytorch-tutorial - PyTorch Tutorial for Deep Learning Researchers

Zulip - Zulip server and web application. Open-source team chat that helps teams stay productive and focused.

transformers - 🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

Jitsi Meet - Jitsi Meet - Secure, Simple and Scalable Video Conferences that you use as a standalone app or embed in your web application.

NanoSim - Nanopore sequence read simulator

Rocket.Chat - The communications platform that puts data protection first.

fossa-cli - Fast, portable and reliable dependency analysis for any codebase. Supports license & vulnerability scanning for large monoliths. Language-agnostic; integrates with 20+ build systems.

Synapse - Synapse: Matrix homeserver written in Python/Twisted.

yolov5 - YOLOv5 🚀 in PyTorch > ONNX > CoreML > TFLite

focalboard - Focalboard is an open source, self-hosted alternative to Trello, Notion, and Asana.

pipeline-structural-variation - Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data

Element - A glossy Matrix collaboration client for the web.