bioinformatics
atlas
| bioinformatics | atlas | |
|---|---|---|
| 32 | 2 | |
| 4,987 | 346 | |
| - | 1.2% | |
| 3.2 | 9.3 | |
| 25 days ago | 3 months ago | |
| Python | ||
| - | BSD 3-clause "New" or "Revised" License |
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bioinformatics
- Biostats training beyond university coursework
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Online Courses in Bioinformatics
hope this helps ✌🏾
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Beginner Learner
OSSU — Path to a free self-taught education in Bioinformatics
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Can anyone be a bioinformatician from online courses?
OSSU study plan for example https://github.com/ossu/bioinformatics
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Master's, PhD, or learning on my own
In trying to merge the skills I have, I'm currently making my way through OSSU/bioinformatics, which seems like a pretty solid self-teaching guide.
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Does this CS degree prepare you well for grad school?
If you are looking for an online post bacc to get into bioinformatics, then CU Boulder would probably be a better fit for you, or some kind of data science bootcamp. If you've already got the math and science down, then you don't really need an academic degree, you just need to learn how to code. You can also check out OSSU here: https://github.com/ossu/bioinformatics
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is this a good roadmap?
Looks good enough at a glance, but this https://github.com/ossu/bioinformatics is more complete and probably better
- can one learn bioinformatics independently?
- I’m thinking about applying and enrolling in the program, but I have a few questions.
- What free online course would you recommend? Strong interest in genetics but no background in informatics (or maths). Want to tinker with my WGS data in conjunction w/ online data sets.
atlas
- Resources to learn genetic data manipulation basics?
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Is it possible to calculate relative abundance of microorganisms in a community through shotgun-metagenomics?
You might want to check Atlas, an assembly/binning based pipeline for metagenomics data Publication Github
What are some alternatives?
data-science - :bar_chart: Path to a free self-taught education in Data Science!
kraken-biom - Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).
Awesome-Bioinformatics - A curated list of awesome Bioinformatics libraries and software.
pypsa-eur - PyPSA-Eur: A Sector-Coupled Open Optimisation Model of the European Energy System
textbook-curriculum - Ada Developers Academy Online Curriculum
GraphBin2 - ☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
pythonidae - Curated decibans of scientific programming resources in Python.
zarp - The Zavolab Automated RNA-seq Pipeline
Bioinformatics-pipeline - Courses, tutorials and books that facilitate bioinformatics.
chipseq-smk-pipeline - ChIP-Seq processing pipeline on snakemake