awscurl
curl-like access to AWS resources with AWS Signature Version 4 request signing. (by okigan)
amazon-genomics-cli-demos
Demos of what can be done with the Amazon Genomics CLI (by aws-samples)
| awscurl | amazon-genomics-cli-demos | |
|---|---|---|
| 3 | 1 | |
| 710 | 3 | |
| - | - | |
| 6.3 | 0.0 | |
| 24 days ago | about 2 years ago | |
| Python | Jupyter Notebook | |
| MIT License | MIT No Attribution |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
awscurl
Posts with mentions or reviews of awscurl.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-04-26.
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Profiling workflows with the Amazon Genomics CLI
Under the hood, agc uses the GA4GH Workflow Execution Schema (WES) to communicate with AWS resources to run workflows. Each AGC context deploys a GA4GH WES endpoint which you can send requests to directly. The endpoint requires AWS SigV4 signed requests, so the easiest way to talk to it is with a tool like awscurl, which does the request signing for you.
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AWS makes one-time donation of $5000 to curl
https://github.com/okigan/awscurl Not by aws though
- Amazon S3 and python requests/curl
amazon-genomics-cli-demos
Posts with mentions or reviews of amazon-genomics-cli-demos.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-04-26.
-
Profiling workflows with the Amazon Genomics CLI
Importantly, the method above can be used for any workflow that AGC can run so you don’t have to remember engine specific details of how to get such profiling information. This opens up the possibility of comparing the performance a workflow across workflow engines, which is something I’ll explore further in a future blog post. In the meantime, I recommend generating some plots of your own! All the Python code I used above is available in Github.
What are some alternatives?
When comparing awscurl and amazon-genomics-cli-demos you can also consider the following projects:
httpie - 🥧 HTTPie CLI — modern, user-friendly command-line HTTP client for the API era. JSON support, colors, sessions, downloads, plugins & more.
full_spectrum_bioinformatics - An open-access bioinformatics text
cobol-on-wheelchair - Micro web-framework for COBOL
amazon-genomics-cli
rate.sx - :moneybag: curl cryptocurrencies exchange rates
wttr.in - :partly_sunny: The right way to check the weather
erlcloud - AWS APIs library for Erlang (Amazon EC2, S3, SQS, DDB, ELB and etc)
gatk4-data-processing - Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools