bioinformatics
OSGenome
bioinformatics | OSGenome | |
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1 | 2 | |
3 | 107 | |
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6.5 | 3.2 | |
7 months ago | 3 months ago | |
Python | Python | |
- | GNU General Public License v3.0 only |
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bioinformatics
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Coding
https://github.com/ashinzekene/bioinformatics This requires more coding skills but goes over some common algorithms in bioinformatics
OSGenome
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How to get a DNA report using AncestryDNA/23andme raw data without uploading to another server?
I think OSGenome by u/Sweet-Sir-10 would do the trick.
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OSGenome shows a bad genotype combination, while Promethease says differently
So, I have done 23andme test, which only has Ancestry+Traits available for my country. To get the health data, I've downloaded my raw data from 23andme and first ran it through OSGenome: https://github.com/mentatpsi/OSGenome
What are some alternatives?
masurca
snappy - Helps you browse through and interpret your genotype data
Genome - Genome Network Ala Neural Network
Genetic-Trait-Detector - This python script detects known traits in raw human genetic data.
deepvariant - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Structure_threader - A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".
NanoSim - Nanopore sequence read simulator
flask - The Python micro framework for building web applications. [Moved to: https://github.com/pallets/flask]
dash - Data Apps & Dashboards for Python. No JavaScript Required.
Flask - The Python micro framework for building web applications.