arcsv VS Sniffles

Compare arcsv vs Sniffles and see what are their differences.

arcsv

Complex structural variant detection from WGS data (by SUwonglab)
Genomics variant-calling structural-variation
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Sniffles

Structural variation caller using third generation sequencing (by fritzsedlazeck)
Bioinformatics structural-variations ngm-lr pacbio nanopore structural-variation bioconda
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arcsv Sniffles
1 1
21 515
- -
4.3 7.7
about 2 months ago 14 days ago
Python Python
MIT License GNU General Public License v3.0 or later
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
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arcsv

Posts with mentions or reviews of arcsv. We have used some of these posts to build our list of alternatives and similar projects.

Sniffles

Posts with mentions or reviews of Sniffles. We have used some of these posts to build our list of alternatives and similar projects.

What are some alternatives?

When comparing arcsv and Sniffles you can also consider the following projects:

truvari - Structural variant toolkit for VCFs

MultiQC - Aggregate results from bioinformatics analyses across many samples into a single report.

fastp - An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

manta - Structural variant and indel caller for mapped sequencing data

pipeline-structural-variation - Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data

Sniffles vs truvari Sniffles vs MultiQC Sniffles vs fastp Sniffles vs manta Sniffles vs pipeline-structural-variation