Sniffles Alternatives

Similar projects and alternatives to Sniffles based on common topics and language

• truvari

  1 285 9.2 Python Sniffles VS truvari

  Structural variant toolkit for VCFs

  

• MultiQC

  5 1,163 9.7 JavaScript Sniffles VS MultiQC

  Aggregate results from bioinformatics analyses across many samples into a single report.

  

• WorkOS

  workos.com sponsored

  The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.

  

• fastp

  9 1,768 4.7 C++ Sniffles VS fastp

  An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

  

• manta

  3 363 0.0 C++ Sniffles VS manta

  Discontinued Structural variant and indel caller for mapped sequencing data (by Illumina)

  

• pipeline-structural-variation

  1 87 1.6 Python Sniffles VS pipeline-structural-variation

  Discontinued Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data

  

• InfluxDB

  www.influxdata.com sponsored

  Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.