ViennaRNAParser VS samtools

Compare ViennaRNAParser vs samtools and see what are their differences.

ViennaRNAParser

By eggzilla
Specific Industries Bioinformatics
Source Code
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samtools

[Moved to: https://github.com/ingolia/SamTools] (by ingolia)
Specific Industries Bioinformatics Samtools

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ViennaRNAParser samtools
- -
3 10
- -
0.0 0.0
over 6 years ago almost 8 years ago
Haskell C
GNU General Public License v3.0 only MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

ViennaRNAParser

Posts with mentions or reviews of ViennaRNAParser. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning ViennaRNAParser yet.
Tracking mentions began in Dec 2020.

samtools

Posts with mentions or reviews of samtools. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning samtools yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing ViennaRNAParser and samtools you can also consider the following projects:

FormalGrammars - Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)

Genbank - Genbank format tools and parser

hPDB - PDB parser in Haskell

seqtk - Toolkit for processing sequences in FASTA/Q formats

BioHMM - Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format.

libdna - ♥ Essential Functions for DNA Manipulation

Forestry - Science and craft of forests

RNAlien - RNAlien - unsupervised RNA family model construction

phybin - Binning (Newick) Phylogenetic Trees by Topology

BlastHTTP - Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice

ViennaRNAParser vs FormalGrammars samtools vs Genbank ViennaRNAParser vs hPDB samtools vs seqtk ViennaRNAParser vs BioHMM samtools vs libdna ViennaRNAParser vs Forestry samtools vs RNAlien ViennaRNAParser vs phybin samtools vs phybin ViennaRNAParser vs RNAlien samtools vs BlastHTTP