samtools VS RNAlien

Compare samtools vs RNAlien and see what are their differences.

samtools

[Moved to: https://github.com/ingolia/SamTools] (by ingolia)
Specific Industries Bioinformatics Samtools

DISCONTINUED

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RNAlien

RNAlien - unsupervised RNA family model construction (by eggzilla)
Specific Industries Bioinformatics rna rna-family covariance-model homology-search Haskell
Source Code
rna.tbi.univie.ac.at
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samtools RNAlien
- -
10 14
- -
0.0 0.0
almost 8 years ago almost 3 years ago
C Haskell
MIT License GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

samtools

Posts with mentions or reviews of samtools. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning samtools yet.
Tracking mentions began in Dec 2020.

RNAlien

Posts with mentions or reviews of RNAlien. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning RNAlien yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing samtools and RNAlien you can also consider the following projects:

Genbank - Genbank format tools and parser

ViennaRNAParser

Gene-CluEDO - Gene Cluster Evolution Determined Order

seqtk - Toolkit for processing sequences in FASTA/Q formats

bio-sequence

libdna - ♥ Essential Functions for DNA Manipulation

FormalGrammars - Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)

phybin - Binning (Newick) Phylogenetic Trees by Topology

vcf - Haskell library to handle VCF (Variant Call Format) files

BlastHTTP - Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice

MutationOrder - most likely order of mutation events in RNA

samtools vs Genbank RNAlien vs ViennaRNAParser samtools vs ViennaRNAParser RNAlien vs Gene-CluEDO samtools vs seqtk RNAlien vs bio-sequence samtools vs libdna RNAlien vs FormalGrammars samtools vs phybin RNAlien vs vcf samtools vs BlastHTTP RNAlien vs MutationOrder