ViennaRNAParser VS hPDB

Compare ViennaRNAParser vs hPDB and see what are their differences.

Our great sponsors
  • SonarLint - Clean code begins in your IDE with SonarLint
  • Zigi - Close all those tabs. Zigi will handle your updates.
  • Scout APM - Truly a developer’s best friend
  • InfluxDB - Build time-series-based applications quickly and at scale.
ViennaRNAParser hPDB
0 0
3 22
- -
0.0 0.0
about 5 years ago almost 4 years ago
Haskell Haskell
GNU General Public License v3.0 only BSD 3-clause "New" or "Revised" License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

ViennaRNAParser

Posts with mentions or reviews of ViennaRNAParser. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning ViennaRNAParser yet.
Tracking mentions began in Dec 2020.

hPDB

Posts with mentions or reviews of hPDB. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning hPDB yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing ViennaRNAParser and hPDB you can also consider the following projects:

FormalGrammars - Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)

Forestry - Science and craft of forests

BioHMM - Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format.

phybin - Binning (Newick) Phylogenetic Trees by Topology

RNAlien - RNAlien - unsupervised RNA family model construction

BlastHTTP - Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice

samtools - [Moved to: https://github.com/ingolia/SamTools]

ClustalParser - Parse output of Clustal tools

ADPfusionForest - Dynamic programming on tree and forest structures

cmv - Visualize HMMs, CMs and their comparisons

TaxonomyTools - Tools to process and visualize NCBI taxonomy data

seqloc - Bio.SeqLoc