ViennaRNAParser VS BioHMM

Compare ViennaRNAParser vs BioHMM and see what are their differences.

BioHMM

Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format. (by eggzilla)
Our great sponsors
  • Scout APM - Truly a developer’s best friend
  • Zigi - Close all those tabs. Zigi will handle your updates.
  • SonarQube - Static code analysis for 29 languages.
  • InfluxDB - Build time-series-based applications quickly and at scale.
ViennaRNAParser BioHMM
0 0
3 3
- -
0.0 0.0
about 5 years ago over 5 years ago
Haskell Haskell
GNU General Public License v3.0 only GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

ViennaRNAParser

Posts with mentions or reviews of ViennaRNAParser. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning ViennaRNAParser yet.
Tracking mentions began in Dec 2020.

BioHMM

Posts with mentions or reviews of BioHMM. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning BioHMM yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing ViennaRNAParser and BioHMM you can also consider the following projects:

FormalGrammars - Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)

hPDB - PDB parser in Haskell

Forestry - Science and craft of forests

phybin - Binning (Newick) Phylogenetic Trees by Topology

RNAlien - RNAlien - unsupervised RNA family model construction

BlastHTTP - Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice

rank-product - Collects the functions pertaining to finding the rank product of a data set as well as the associated p-value.

ADPfusionForest - Dynamic programming on tree and forest structures

ClustalParser - Parse output of Clustal tools

samtools - [Moved to: https://github.com/ingolia/SamTools]

TaxonomyTools - Tools to process and visualize NCBI taxonomy data

cmv - Visualize HMMs, CMs and their comparisons