Top 4 taxonomic-classification Open-Source Projects

sourmash

1 432 9.4 Python

Quickly search, compare, and analyze genomic and metagenomic data sets.
Metabuli

1 62 9.0 C++

Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

Project mention: Genomic sequence classification based on k-mers distribution | /r/bioinformatics | 2023-12-04

InfluxDB

www.influxdata.com featured

Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
kraken-biom

1 43 0.0 Python

Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).
paroxython

1 33 0.0 Python

Tag and recommend Python exercises based on algorithmic features

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).